MolNFT v1 · #187986 · protein
Cryoem structure of the YEJM/LAPB complex
7T6D: “Cryoem structure of the YEJM/LAPB complex”. Electron microscopy, 2 ligands (LPP, PGV). MolNFT v1 #187986 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7T6D
- Type
- protein
- Length
- 1,181 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C3TC27, C3T3G2
- Ligands
- LPP, PGV
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 389 | — | C3TC27 |
| B | — | protein | 381 | — | C3TC27 |
| C | — | protein | 213 | — | C3T3G2 |
| D | — | protein | 198 | — | C3T3G2 |
Ligands and binding sites
- LPP · 2-(hexadecanoyloxy)-1-[(phosphonooxy)methyl]ethyl hexadecanoate · ligand · chains A, C
- PGV · (1R)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11E)-octadec-11-enoate · ligand · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7T6D · CryoEM structure of the YejM/LapB complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3TC27
- Every structure of UniProt C3T3G2
- Elsewhere: RCSB PDB 7T6D · PDBe 7T6D · UniProt C3TC27 · UniProt C3T3G2
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