MolNFT v1 · #187931 · protein
SARS-cov-2 S (spike glycoprotein) D614G with three (3) rbds up, bound to antibody 2-7 scfv, composite MAP
7T3M: “SARS-cov-2 S (spike glycoprotein) D614G with three (3) rbds up, bound to antibody 2-7 scfv, composite MAP”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #187931 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7T3M
- Type
- protein
- Length
- 3,771 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NAG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, G | — | protein | 1025 | — | P0DTC2 |
| D, H, I | — | protein | 122 | — | — |
| J, K, L | — | protein | 110 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 51 copies · chains A, C, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7T3M · SARS-CoV-2 S (Spike Glycoprotein) D614G with Three (3) RBDs Up, Bound to Antibody 2-7… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7T3M · PDBe 7T3M · UniProt P0DTC2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.