MolNFT v1 · #187879 · protein + DNA
Cryo-EM structure of DNMT5 pseudo-ternary complex solved by incubation with hemimethylated DNA and SAM
7T02: “Cryo-EM structure of DNMT5 pseudo-ternary complex solved by incubation with hemimethylated DNA and SAM”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #187879 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7T02
- Type
- protein + DNA
- Length
- 1,777 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- J9VI03
- Ligands
- ZN
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1752 | — | J9VI03 |
| B | — | dna | 12 | — | — |
| D | — | dna | 13 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7T02 · Cryo-EM structure of DNMT5 pseudo-ternary complex solved by incubation with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9VI03
- Elsewhere: RCSB PDB 7T02 · PDBe 7T02 · UniProt J9VI03
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