MolNFT v1 · #187785 · protein + RNA
Cryo-EM structure of arabidopsis AGO10-guide-target RNA complex in a central duplex conformation
7SWF: “Cryo-EM structure of arabidopsis AGO10-guide-target RNA complex in a central duplex conformation”. Electron microscopy, 1 ligand (MG). MolNFT v1 #187785 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7SWF
- Type
- protein + RNA
- Length
- 811 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9XGW1
- Ligands
- MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 778 | — | Q9XGW1 |
| B | — | rna | 17 | — | — |
| D | — | rna | 16 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SWF · Cryo-EM structure of Arabidopsis Ago10-guide-target RNA complex in a central duplex… · the same entry in another collection · chain D against D, TM-score 1.00
- Q9XGW1 · AlphaFold monomer V2.0 prediction for protein argonaute 10 (Q9XGW1) · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XGW1
- Elsewhere: RCSB PDB 7SWF · PDBe 7SWF · UniProt Q9XGW1
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