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MolNFT v1 · #187753 · protein

Structure of CHK1 10-pt. mutant complex with LRRK2 inhibitor 24

7SUJ · SERINE/THREONINE-protein kinase CHK1: “Structure of CHK1 10-pt. mutant complex with LRRK2 inhibitor 24”. X-ray diffraction, 1 ligand (BYL), 2 pockets (best druggability 0.62). MolNFT v1 #187753 on GenesisL1: 3D structure, binding…

PDB
7SUJ
Type
protein
Length
512 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase CHK1
EC
2.7.11.1
UniProt
O14757
Ligands
BYL
Pockets
2 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 19% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BSERINE/THREONINE-protein kinase CHK1 (EC 2.7.11.1)protein25633% helix, 19% strandO14757

Ligands and binding sites

  • BYL · (3R,4R)-4-{4-[6-chloro-2-({1-[(1R)-2,2-difluorocyclopropyl]-5-methyl-1H-pyrazol-4-yl}amino) quinazolin-7-yl]piperidin-1-yl}-4-methyloxolan-3-ol · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12430.620.8129BYL
22190.600.8131BYL

Interfaces

1 interface between chains.

  • A–B · 210 Ų buried · 3 hydrogen bonds · protein-protein

Compared structures

  • 7SUJ · Structure of CHK1 10-pt. mutant complex with LRRK2 inhibitor 24 · the same entry in another collection · chain B against B, TM-score 1.00
  • O14757 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase CHK1 (O14757) · a predicted model of the same protein · chain B against A, TM-score 0.99
  • 2C3K · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • 2C3L · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain B against A, TM-score 0.98
  • 2C3J · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain B against A, TM-score 0.98

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