MolNFT v1 · #187670 · protein
Crystal structure of the SARS-cov-2 receptor binding domain in complex with vnar 2C02
7SPP: “Crystal structure of the SARS-cov-2 receptor binding domain in complex with vnar 2C02”. X-ray diffraction, 2 ligands (NAG, CL). MolNFT v1 #187670 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7SPP
- Type
- protein
- Length
- 305 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NAG, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 195 | — | P0DTC2 |
| C | — | protein | 110 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
- CL · Chloride ion · ion · chains C
- EDO · 1,2-ethanediol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SPP · Crystal structure of the SARS-CoV-2 receptor binding domain in complex with VNAR 2C02 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7SPP · PDBe 7SPP · UniProt P0DTC2
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