MolNFT v1 · #187614 · protein
Structure of human SARS-cov-2 spike glycoprotein trimer bound by neutralizing antibody C1C-A3 Fab (variable region)
7SN3: “Structure of human SARS-cov-2 spike glycoprotein trimer bound by neutralizing antibody C1C-A3 Fab (variable…”. Electron microscopy, 2 ligands (NAG, BMA). MolNFT v1 #187614 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7SN3
- Type
- protein
- Length
- 3,451 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NAG, BMA
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 925 | — | P0DTC2 |
| B | — | protein | 924 | — | P0DTC2 |
| C | — | protein | 915 | — | P0DTC2 |
| D, F, H | — | protein | 121 | — | — |
| E, G, L | — | protein | 108 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 51 copies · chains A, E, B, G, C, L
- BMA · beta-D-mannopyranose · sugar · 3 copies · chains E, G, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SN3 · Structure of human SARS-CoV-2 spike glycoprotein trimer bound by neutralizing antibody… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7SN3 · PDBe 7SN3 · UniProt P0DTC2
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