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MolNFT v1 · #187549 · protein

Crystal structure of SARS-cov-2 spike stem helix peptide in complex with neutralizing antibody CC40.8

7SJS: “Crystal structure of SARS-cov-2 spike stem helix peptide in complex with neutralizing antibody CC40.8”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #187549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7SJS
Type
protein
Length
441 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0DTC2
Ligands
SO4

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
H—protein208——
L—protein211——
C—protein22—P0DTC2

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 5 copies · chains H, C, L
  • ACT · Acetate ion · additive · chains H, L
  • GOL · Glycerol · additive · chains L

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7SJS · Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing… · the same entry in another collection · chain H against H, TM-score 1.00

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