MolNFT v1 · #187548 · protein + DNA
Cryo-EM structure of adna-ADNB(W325A) in complex with DNA and amppnp
7SJR: “Cryo-EM structure of adna-ADNB(W325A) in complex with DNA and amppnp”. Electron microscopy, 3 ligands (SF4, ANP, MG). MolNFT v1 #187548 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7SJR
- Type
- protein + DNA
- Length
- 1,748 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A653FJ17, A0A0D6HKQ2
- Ligands
- SF4, ANP, MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 802 | — | A0A653FJ17 |
| A | — | protein | 911 | — | A0A0D6HKQ2 |
| C | — | dna | 35 | — | — |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · chains A
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SJR · Cryo-EM structure of AdnA-AdnB(W325A) in complex with DNA and AMPPNP · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A653FJ17
- Every structure of UniProt A0A0D6HKQ2
- Elsewhere: RCSB PDB 7SJR · PDBe 7SJR · UniProt A0A653FJ17 · UniProt A0A0D6HKQ2
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