MolNFT v1 · #187192 · protein
Crystal structure of SARS-cov-2 S receptor-binding domain (rbd) in complex COV11 Fab
7S4S: “Crystal structure of SARS-cov-2 S receptor-binding domain (rbd) in complex COV11 Fab”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #187192 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7S4S
- Type
- protein
- Length
- 627 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NAG, SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 193 | — | P0DTC2 |
| H | — | protein | 219 | — | — |
| L | — | protein | 215 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
- SO4 · Sulfate ion · ion · 5 copies · chains A, H, L
- ACT · Acetate ion · additive · 4 copies · chains A, H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7S4S · Crystal Structure of SARS-CoV-2 S receptor-binding domain (RBD) in complex CoV11 Fab · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7S4S · PDBe 7S4S · UniProt P0DTC2
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