MolNFT v1 · #187076 · protein
Structure of the SARS-cov-2 S 6P trimer in complex with neutralizing antibody N-612-017
7S0C: “Structure of the SARS-cov-2 S 6P trimer in complex with neutralizing antibody N-612-017”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #187076 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7S0C
- Type
- protein
- Length
- 3,818 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NAG
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, C | — | protein | 968 | — | P0DTC2 |
| A | — | protein | 1004 | — | P0DTC2 |
| H, M | — | protein | 225 | — | — |
| L, N | — | protein | 214 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 31 copies · chains B, A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7S0C · Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody N-612-017 · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7S0C · PDBe 7S0C · UniProt P0DTC2
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