MolNFT v1 · #187017 · protein
Multidrug efflux pump adej with tp-6076 bound
7RY3: “Multidrug efflux pump adej with tp-6076 bound”. Electron microscopy, 1 ligand (80P). MolNFT v1 #187017 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RY3
- Type
- protein
- Length
- 3,140 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q2FD94
- Ligands
- 80P
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1047 | — | Q2FD94 |
| B | — | protein | 1045 | — | Q2FD94 |
| C | — | protein | 1048 | — | Q2FD94 |
Ligands and binding sites
- 80P · (4S,4aS,5aR,12aS)-4-(diethylamino)-3,10,12,12a-tetrahydroxy-1,11-dioxo-8-[(2S)-pyrrolidin-2-yl]-7-(trifluoromethyl)-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide · ligand · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RY3 · Multidrug Efflux pump AdeJ with TP-6076 bound · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2FD94
- Elsewhere: RCSB PDB 7RY3 · PDBe 7RY3 · UniProt Q2FD94
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