MolNFT v1 · #186907 · protein

Dahp synthase complex with trifluoropyruvate oxime

7RUD: “Dahp synthase complex with trifluoropyruvate oxime”. X-ray diffraction, 1 ligand (7QE). MolNFT v1 #186907 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7RUD
Type: protein
Length: 1,369 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0AB91
Ligands: 7QE

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	341	—	P0AB91
B	—	protein	343	—	P0AB91
C	—	protein	343	—	P0AB91
D	—	protein	342	—	P0AB91

Ligands and binding sites

7QE · (2Z)-3,3,3-trifluoro-2-(hydroxyimino)propanoic acid · ligand · 3 copies · chains B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7RUD · DAHP synthase complex with trifluoropyruvate oxime · the same entry in another collection · chain D against D, TM-score 1.00
P0AB91 · AlphaFold monomer V2.0 prediction for phospho-2-dehydro-3-deoxyheptonate aldolase… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0AB91
Elsewhere: RCSB PDB 7RUD · PDBe 7RUD · UniProt P0AB91

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