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MolNFT v1 · #186906 · protein

Metazoan pre-targeting get complex with sgta (cbuggs)

7RUC: “Metazoan pre-targeting get complex with sgta (cbuggs)”. Electron microscopy, 3 ligands (ATP, MG, ZN). MolNFT v1 #186906 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7RUC
Type
protein
Length
1,344 residues
Chains
7
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q6IQE5, Q7L5D6, P46379, P11441
Ligands
ATP, MG, ZN

Structure

electron microscopy · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein306—Q6IQE5
B—protein305—Q6IQE5
C, F—protein271—Q7L5D6
D—protein43—P46379
G—protein100—P46379
H—protein48—P11441

Ligands and binding sites

  • ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains A, B
  • MG · Magnesium ion · metal · 2 copies · chains A, B
  • ZN · Zinc ion · metal · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7RUC · Metazoan pre-targeting GET complex with SGTA (cBUGGS) · the same entry in another collection · chain H against H, TM-score 1.00
  • Q7L5D6 · AlphaFold monomer V2.0 prediction for golgi to er traffic protein 4 homolog (Q7L5D6) · a predicted model of the same protein · chain F against A, TM-score 0.94
  • Q6IQE5 · AlphaFold monomer V2.0 prediction for ATPase GET3 (Q6IQE5) · a predicted model of the same protein · chain A against A, TM-score 0.90
  • P11441 · AlphaFold monomer V2.0 prediction for ubiquitin-like protein 4A (P11441) · a predicted model of the same protein · chain H against A, TM-score 0.83

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