MolNFT v1 · #186906 · protein
Metazoan pre-targeting get complex with sgta (cbuggs)
7RUC: “Metazoan pre-targeting get complex with sgta (cbuggs)”. Electron microscopy, 3 ligands (ATP, MG, ZN). MolNFT v1 #186906 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RUC
- Type
- protein
- Length
- 1,344 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6IQE5, Q7L5D6, P46379, P11441
- Ligands
- ATP, MG, ZN
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 306 | — | Q6IQE5 |
| B | — | protein | 305 | — | Q6IQE5 |
| C, F | — | protein | 271 | — | Q7L5D6 |
| D | — | protein | 43 | — | P46379 |
| G | — | protein | 100 | — | P46379 |
| H | — | protein | 48 | — | P11441 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
- ZN · Zinc ion · metal · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RUC · Metazoan pre-targeting GET complex with SGTA (cBUGGS) · the same entry in another collection · chain H against H, TM-score 1.00
- Q7L5D6 · AlphaFold monomer V2.0 prediction for golgi to er traffic protein 4 homolog (Q7L5D6) · a predicted model of the same protein · chain F against A, TM-score 0.94
- Q6IQE5 · AlphaFold monomer V2.0 prediction for ATPase GET3 (Q6IQE5) · a predicted model of the same protein · chain A against A, TM-score 0.90
- P11441 · AlphaFold monomer V2.0 prediction for ubiquitin-like protein 4A (P11441) · a predicted model of the same protein · chain H against A, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6IQE5
- Every structure of UniProt Q7L5D6
- Every structure of UniProt P46379
- Every structure of UniProt P11441
- Elsewhere: RCSB PDB 7RUC · PDBe 7RUC · UniProt Q6IQE5 · UniProt Q7L5D6 · UniProt P46379 · UniProt P11441
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