GL1X · GenesisL1 explorer

MolNFT v1 · #186797 · protein

X25-2 domain of SCA5 from ruminococcus bromii

7RPY: “X25-2 domain of SCA5 from ruminococcus bromii”. X-ray diffraction, 1 ligand (GLC). MolNFT v1 #186797 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7RPY
Type
protein
Length
241 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Ligands
GLC

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein241——

Ligands and binding sites

  • GLC · alpha-D-glucopyranose · sugar · 3 copies · chains A
  • ACT · Acetate ion · additive · 7 copies · chains A
  • GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7RPY · X25-2 domain of Sca5 from Ruminococcus bromii · the same entry in another collection · chain A against A, TM-score 1.00

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