MolNFT v1 · #186739 · protein
SARS-cov-2 main protease in complex with a cyclic peptide inhibitor
7RNW: “SARS-cov-2 main protease in complex with a cyclic peptide inhibitor”. X-ray diffraction, 1 ligand (ACE). MolNFT v1 #186739 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RNW
- Type
- protein
- Length
- 1,255 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- ACE
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 303 | — | P0DTD1 |
| B, C | — | protein | 304 | — | P0DTD1 |
| X | — | protein | 8 | — | — |
| Y | — | protein | 10 | — | — |
| Z | — | protein | 13 | — | — |
| W | — | protein | 10 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 4 copies · chains C, X, A, Y, B, Z, D, W
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RNW · SARS-CoV-2 Main Protease in complex with a cyclic peptide inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 7RNW · PDBe 7RNW · UniProt P0DTD1
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