MolNFT v1 · #186508 · protein

Crystal structure of a stable heparanase mutant

7RG8: “Crystal structure of a stable heparanase mutant”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #186508 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7RG8
Type: protein
Length: 459 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9Y251
Ligands: NA

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	385	—	Q9Y251
B	—	protein	74	—	Q9Y251

Ligands and binding sites

NA · Sodium ion · metal · 4 copies · chains A, B
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7RG8 · Crystal Structure of a Stable Heparanase Mutant · the same entry in another collection · chain A against A, TM-score 1.00
Q9Y251 · AlphaFold monomer V2.0 prediction for heparanase (Q9Y251) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y251
Elsewhere: RCSB PDB 7RG8 · PDBe 7RG8 · UniProt Q9Y251

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