MolNFT v1 · #186476 · protein
Crystal structure of broadly neutralizing antibody MAB1198 in complex with hepatitis C virus envelope glycoprotein E2 ectodomain
7RFB: “Crystal structure of broadly neutralizing antibody MAB1198 in complex with hepatitis C virus envelope…”. X-ray diffraction, 3 ligands (NAG, MAN, BMA). MolNFT v1 #186476 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RFB
- Type
- protein
- Length
- 1,320 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2P0NE26
- Ligands
- NAG, MAN, BMA
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 221 | — | — |
| B | — | protein | 218 | — | — |
| C | — | protein | 226 | — | A0A2P0NE26 |
| D | — | protein | 217 | — | A0A2P0NE26 |
| H | — | protein | 219 | — | — |
| L | — | protein | 219 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 18 copies · chains C, D
- MAN · alpha-D-mannopyranose · sugar · 9 copies
- BMA · beta-D-mannopyranose · sugar · 6 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RFB · Crystal structure of broadly neutralizing antibody mAb1198 in complex with Hepatitis C… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2P0NE26
- Elsewhere: RCSB PDB 7RFB · PDBe 7RFB · UniProt A0A2P0NE26
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