MolNFT v1 · #186424 · protein
Crystal structure of the de novo designed binding protein H3MB in complex with the 1968 influenza a virus hemagglutinin
7RDH: “Crystal structure of the de novo designed binding protein H3MB in complex with the 1968 influenza a virus…”. X-ray diffraction, 2 ligands (NAG, BMA). MolNFT v1 #186424 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RDH
- Type
- protein
- Length
- 1,591 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q91MA7
- Ligands
- NAG, BMA
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 316 | — | Q91MA7 |
| B | — | protein | 172 | — | Q91MA7 |
| D | — | protein | 185 | — | Q91MA7 |
| E | — | protein | 317 | — | Q91MA7 |
| F | — | protein | 171 | — | Q91MA7 |
| G, H | — | protein | 57 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 19 copies · chains A, G, B, C, D, E, H
- BMA · beta-D-mannopyranose · sugar · 2 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RDH · Crystal structure of the de novo designed binding protein H3mb in complex with the 1968… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q91MA7
- Elsewhere: RCSB PDB 7RDH · PDBe 7RDH · UniProt Q91MA7
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