MolNFT v1 · #186305 · protein

Methanococcus maripaludis chaperonin, closed conformation 4

7R9K: “Methanococcus maripaludis chaperonin, closed conformation 4”. Electron microscopy, 8 pockets (best druggability 0.81). MolNFT v1 #186305 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7R9K
Type: protein
Length: 505 residues
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Chaperonin
UniProt: Q877G8
Pockets: 8 · best druggability 0.81

Structure

electron microscopy · 1 distinct chain · 47% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
J	Chaperonin	protein	505	47% helix, 10% strand	Q877G8

Pockets

8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	378	0.81	0.90	49	empty
2	59	0.72	0.97	19	empty
3	93	0.43	0.79	19	empty
4	81	0.43	0.80	23	empty
5	107	0.40	0.76	23	empty

Compared structures

7R9K · Methanococcus maripaludis chaperonin, closed conformation 4 · the same entry in another collection · chain J against J, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q877G8
Elsewhere: RCSB PDB 7R9K · PDBe 7R9K · UniProt Q877G8

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