MolNFT v1 · #186303 · protein
Methanococcus maripaludis chaperonin, open conformation 2
7R9I: “Methanococcus maripaludis chaperonin, open conformation 2”. Electron microscopy, 10 pockets (best druggability 0.78). MolNFT v1 #186303 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7R9I
- Type
- protein
- Length
- 505 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chaperonin
- UniProt
- Q877G8
- Pockets
- 10 · best druggability 0.78
Structure
electron microscopy · 1 distinct chain · 45% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| J | Chaperonin | protein | 505 | 45% helix, 9% strand | Q877G8 |
Pockets
10 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1108 | 0.78 | 0.80 | 97 | empty |
| 2 | 73 | 0.72 | 0.95 | 17 | empty |
| 3 | 82 | 0.71 | 0.95 | 22 | empty |
| 4 | 75 | 0.67 | 0.93 | 18 | empty |
| 5 | 141 | 0.66 | 0.87 | 39 | empty |
Compared structures
- 7R9I · Methanococcus maripaludis chaperonin, open conformation 2 · the same entry in another collection · chain J against J, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q877G8
- Elsewhere: RCSB PDB 7R9I · PDBe 7R9I · UniProt Q877G8
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