MolNFT v1 · #186300 · protein + RNA
Wild-type yeast pseudouridine synthase, PUS1, bound to 5-fluorouracil RNA
7R9F: “Wild-type yeast pseudouridine synthase, PUS1, bound to 5-fluorouracil RNA”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #186300 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7R9F
- Type
- protein + RNA
- Length
- 392 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q12211
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 379 | — | Q12211 |
| B | — | rna | 13 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7R9F · Wild-type yeast Pseudouridine Synthase, PUS1, bound to 5-Fluorouracil RNA · the same entry in another collection · chain A against A, TM-score 1.00
- Q12211 · AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase 1 (Q12211) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12211
- Elsewhere: RCSB PDB 7R9F · PDBe 7R9F · UniProt Q12211
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