MolNFT v1 · #186194 · protein
Ftra-P19 from rubrivivax gelatinosus in complex with copper and magnesium (X1)
7R5E: “Ftra-P19 from rubrivivax gelatinosus in complex with copper and magnesium (X1)”. X-ray diffraction, 2 ligands (MG, CU). MolNFT v1 #186194 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7R5E
- Type
- protein
- Length
- 312 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ftra-P19
- Ligands
- MG, CU
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ftra-P19 | protein | 155 | 4% helix, 50% strand | — |
| B | Ftra-P19 | protein | 157 | 4% helix, 49% strand | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 3 copies · chains A, B
- CU · Copper (II) ion · metal · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1893 Ų buried · 29 hydrogen bonds · protein-protein
Compared structures
- 7R5E · FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X1) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7R5E · PDBe 7R5E
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