GL1X · GenesisL1 explorer

MolNFT v1 · #18583 · protein

Protein kinase C delta CYS2 domain complexed with phorbol- 13-acetate

1PTR · Protein kinase C delta type: “Protein kinase C delta CYS2 domain complexed with phorbol- 13-acetate”. X-ray diffraction, 2 ligands (PRB, ZN). MolNFT v1 #18583 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1PTR
Type
protein
Length
50 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Protein kinase C delta type
EC
2.7.1.-
UniProt
P28867
Ligands
PRB, ZN

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 24% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AProtein kinase C delta type (EC 2.7.1.-)protein508% helix, 24% strandP28867

Ligands and binding sites

  • PRB · 13-acetylphorbol · ligand · chains A
  • ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1PTR · Protein kinase C delta CYS2 domain complexed with phorbol-13-acetate · the same entry in another collection · chain A against A, TM-score 1.00
  • P28867 · AlphaFold monomer V2.0 prediction for protein kinase C delta type (P28867) · a predicted model of the same protein · chain A against A, TM-score 0.96

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