MolNFT v1 · #185763 · protein

PDZ2 of LNX2 with SARS-cov-2_E pbm complex

7QCT · Ligand of numb protein X 2: “PDZ2 of LNX2 with SARS-cov-2_E pbm complex”. X-ray diffraction. MolNFT v1 #185763 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7QCT
Type: protein
Length: 190 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ligand of numb protein X 2; Envelope small membrane protein
UniProt: Q8N448, P0DTC4

Structure

x-ray diffraction · 2 distinct chains · 16% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Ligand of numb protein X 2	protein	90	17% helix, 37% strand	Q8N448
C, D	Envelope small membrane protein	protein	5	0% helix, 60% strand	P0DTC4

Interfaces

3 interfaces between chains.

A–C · 415 Å² buried · 8 hydrogen bonds · protein-protein
B–D · 414 Å² buried · 6 hydrogen bonds · protein-protein
A–B · 391 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

7QCT · PDZ2 of LNX2 with SARS-CoV-2_E PBM complex · the same entry in another collection · chain A against A, TM-score 1.00
Q8N448 · AlphaFold monomer V2.0 prediction for ligand of numb protein X 2 (Q8N448) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8N448
Every structure of UniProt P0DTC4
Elsewhere: RCSB PDB 7QCT · PDBe 7QCT · UniProt Q8N448 · UniProt P0DTC4

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.