MolNFT v1 · #185574 · protein

Crystal structure and metal binding properties of the periplasmic iron component efem from pseudomonas syringae EFEUOB/M iron-transport system

7Q1G · PEPTIDASE_M75 domain-containing protein: “Crystal structure and metal binding properties of the periplasmic iron component efem from pseudomonas…”. X-ray diffraction, 1 ligand (SO4), 3 pockets (best druggability 0.37). MolNFT v1…

PDB: 7Q1G
Type: protein
Length: 502 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: PEPTIDASE_M75 domain-containing protein
UniProt: Q4ZR20
Ligands: SO4
Pockets: 3 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	PEPTIDASE_M75 domain-containing protein	protein	251	74% helix, 1% strand	Q4ZR20

Ligands and binding sites

SO4 · Sulfate ion · ion · 10 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	91	0.37	0.76	19	empty
2	66	0.30	0.75	13	empty
3	56	0.28	0.74	13	empty

Interfaces

1 interface between chains.

A–B · 720 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

7Q1G · Crystal structure and metal binding properties of the periplasmic iron component EfeM… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q4ZR20
Elsewhere: RCSB PDB 7Q1G · PDBe 7Q1G · UniProt Q4ZR20

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