MolNFT v1 · #185547 · protein
Human carbonic anhydrase I in complex with methyl 2-(benzenesulfonyl)- 4-chloro-5-sulfamoylbenzoate
7Q0D · Carbonic anhydrase 1: “Human carbonic anhydrase I in complex with methyl 2-(benzenesulfonyl)- 4-chloro-5-sulfamoylbenzoate”. X-ray diffraction, 2 ligands (84Z, ZN), 2 pockets (best druggability 0.87). MolNFT v1 #185547 on GenesisL1…
- PDB
- 7Q0D
- Type
- protein
- Length
- 516 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Carbonic anhydrase 1
- EC
- 4.2.1.1
- UniProt
- P00915
- Ligands
- 84Z, ZN
- Pockets
- 2 · best druggability 0.87
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Carbonic anhydrase 1 (EC 4.2.1.1) | protein | 258 | 16% helix, 29% strand | P00915 |
Ligands and binding sites
- 84Z · methyl 4-chloranyl-2-(phenylsulfonyl)-5-sulfamoyl-benzoate · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 16 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · 9 copies · chains A, B
- ACT · Acetate ion · additive · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1124 | 0.87 | 0.88 | 120 | 84Z, PEG, ACT, EDO |
| 2 | 112 | 0.40 | 0.76 | 16 | EDO |
Interfaces
1 interface between chains.
- A–B · 670 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00915
- Elsewhere: RCSB PDB 7Q0D · PDBe 7Q0D · UniProt P00915
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