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MolNFT v1 · #185547 · protein

Human carbonic anhydrase I in complex with methyl 2-(benzenesulfonyl)- 4-chloro-5-sulfamoylbenzoate

7Q0D · Carbonic anhydrase 1: “Human carbonic anhydrase I in complex with methyl 2-(benzenesulfonyl)- 4-chloro-5-sulfamoylbenzoate”. X-ray diffraction, 2 ligands (84Z, ZN), 2 pockets (best druggability 0.87). MolNFT v1 #185547 on GenesisL1…

PDB
7Q0D
Type
protein
Length
516 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Carbonic anhydrase 1
EC
4.2.1.1
UniProt
P00915
Ligands
84Z, ZN
Pockets
2 · best druggability 0.87

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 29% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BCarbonic anhydrase 1 (EC 4.2.1.1)protein25816% helix, 29% strandP00915

Ligands and binding sites

  • 84Z · methyl 4-chloranyl-2-(phenylsulfonyl)-5-sulfamoyl-benzoate · ligand · 2 copies · chains A, B
  • ZN · Zinc ion · metal · 2 copies · chains A, B
  • EDO · 1,2-ethanediol · additive · 16 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · 9 copies · chains A, B
  • ACT · Acetate ion · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
111240.870.8812084Z, PEG, ACT, EDO
21120.400.7616EDO

Interfaces

1 interface between chains.

  • A–B · 670 Ų buried · 13 hydrogen bonds · protein-protein

Compared structures

  • 7Q0D · Human carbonic anhydrase I in complex with Methyl… · the same entry in another collection · chain A against A, TM-score 1.00
  • P00915 · AlphaFold monomer V2.0 prediction for carbonic anhydrase 1 (P00915) · a predicted model of the same protein · chain B against A, TM-score 0.99

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