MolNFT v1 · #185387 · protein
Actinobacterial 2-hydroxyacyl-CoA lyase (achacl) structure in complex with substrate 2-hib-CoA and inactive cofactor 3-deaza-thdp
7PT1: “Actinobacterial 2-hydroxyacyl-CoA lyase (achacl) structure in complex with substrate 2-hib-CoA and inactive…”. X-ray diffraction, 3 ligands (TPW, 3KK, MG). MolNFT v1 #185387 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7PT1
- Type
- protein
- Length
- 1,146 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- TPW, 3KK, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 574 | — | — |
| B | — | protein | 572 | — | — |
Ligands and binding sites
- TPW · 2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophen-2-yl}ethyl trihydrogen diphosphate · ligand · 2 copies · chains A, B
- 3KK · S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3, 5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2, 4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} 2-hydroxy-2-methylpropanethioate · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PT1 · Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) structure in complex with substrate… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7PT1 · PDBe 7PT1
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