MolNFT v1 · #185325 · protein
Crystal structure of campylobacter jejuni DSBA1
7PQ7 · THIOL:DISULFIDE interchange protein dsba: “Crystal structure of campylobacter jejuni DSBA1”. X-ray diffraction, 2 pockets (best druggability 0.60). MolNFT v1 #185325 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PQ7
- Type
- protein
- Length
- 379 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- THIOL:DISULFIDE interchange protein dsba
- UniProt
- A0A1J6PBD5
- Pockets
- 2 · best druggability 0.60
Structure
x-ray diffraction · 2 distinct chains · 56% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | THIOL:DISULFIDE interchange protein dsba | protein | 191 | 55% helix, 12% strand | A0A1J6PBD5 |
| B | THIOL:DISULFIDE interchange protein dsba | protein | 188 | 57% helix, 12% strand | A0A1J6PBD5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 381 | 0.60 | 0.77 | 39 | empty |
| 2 | 292 | 0.58 | 0.77 | 40 | empty |
Interfaces
1 interface between chains.
- A–B · 121 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 7PQ7 · Crystal structure of Campylobacter jejuni DsbA1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1J6PBD5
- Elsewhere: RCSB PDB 7PQ7 · PDBe 7PQ7 · UniProt A0A1J6PBD5
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