MolNFT v1 · #185280 · protein
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody Fab fragment
7PO5: “Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody Fab fragment”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #185280 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PO5
- Type
- protein
- Length
- 4,218 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q696P8
- Ligands
- NAG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| Z, X, H | — | protein | 124 | — | — |
| D, F, L | — | protein | 107 | — | — |
| B, C, A | — | protein | 1175 | — | Q696P8 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 15 copies · chains B, C, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PO5 · Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody… · the same entry in another collection · chain Z against Z, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q696P8
- Elsewhere: RCSB PDB 7PO5 · PDBe 7PO5 · UniProt Q696P8
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