MolNFT v1 · #185224 · protein
Caulobacter crescentus xylonolactonase with D-xylose
7PLB: “Caulobacter crescentus xylonolactonase with D-xylose”. X-ray diffraction, 4 ligands (XYP, XYS, FE2). MolNFT v1 #185224 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PLB
- Type
- protein
- Length
- 576 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9A9Z1
- Ligands
- XYP, XYS, FE2, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 287 | — | Q9A9Z1 |
| B | — | protein | 289 | — | Q9A9Z1 |
Ligands and binding sites
- XYP · beta-D-xylopyranose · sugar · 6 copies · chains A, B
- XYS · alpha-D-xylopyranose · sugar · chains B
- FE2 · Fe (II) ion · metal · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PLB · Caulobacter crescentus xylonolactonase with D-xylose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9A9Z1
- Elsewhere: RCSB PDB 7PLB · PDBe 7PLB · UniProt Q9A9Z1
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