MolNFT v1 · #185214 · protein
Streptococcus pyogenes apo gapn
7PKJ: “Streptococcus pyogenes apo gapn”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #185214 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PKJ
- Type
- protein
- Length
- 3,797 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A7G1J7Q1
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, F | — | protein | 474 | — | A0A7G1J7Q1 |
| C, D, E, G, H | — | protein | 475 | — | A0A7G1J7Q1 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 18 copies · chains A, B, C, F, D, E, G, H
- GOL · Glycerol · additive · 25 copies · chains A, B, D, C, F, E, G, H
- BME · Beta-mercaptoethanol · additive · 8 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PKJ · Streptococcus pyogenes apo GapN · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A7G1J7Q1
- Elsewhere: RCSB PDB 7PKJ · PDBe 7PKJ · UniProt A0A7G1J7Q1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.