MolNFT v1 · #185066 · protein + DNA
The structure of PRIREP1 with dsdna
7PDS: “The structure of PRIREP1 with dsdna”. Electron microscopy, 2 ligands (AGS, MG). MolNFT v1 #185066 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PDS
- Type
- protein + DNA
- Length
- 2,719 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8VLX1
- Ligands
- AGS, MG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 457 | — | Q8VLX1 |
| B | — | protein | 448 | — | Q8VLX1 |
| C | — | protein | 451 | — | Q8VLX1 |
| D | — | protein | 454 | — | Q8VLX1 |
| E | — | protein | 453 | — | Q8VLX1 |
| F | — | protein | 451 | — | Q8VLX1 |
| M | — | dna | 5 | — | — |
Ligands and binding sites
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · 6 copies · chains A, B, C, D, E, F
- MG · Magnesium ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PDS · The structure of PriRep1 with dsDNA · the same entry in another collection · chain F against F, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VLX1
- Elsewhere: RCSB PDB 7PDS · PDBe 7PDS · UniProt Q8VLX1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.