MolNFT v1 · #184819 · protein

Streptomyces coelicolor DATP/ATP-loaded nrdr octamer

7P3Q: “Streptomyces coelicolor DATP/ATP-loaded nrdr octamer”. Electron microscopy, 3 ligands (ATP, DTP, ZN). MolNFT v1 #184819 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7P3Q
Type: protein
Length: 1,176 residues
Chains: 8
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: O69980
Ligands: ATP, DTP, ZN

Structure

electron microscopy · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C, E, G, B, D, F, H	—	protein	147	—	O69980

Ligands and binding sites

ATP · Adenosine-5'-triphosphate · ligand · 8 copies · chains A, C, E, G, B, D, F, H
DTP · 2'-deoxyadenosine 5'-triphosphate · ligand · 8 copies · chains A, B, C, D, E, F, G, H
ZN · Zinc ion · metal · 8 copies · chains A, C, E, G, B, D, F, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7P3Q · Streptomyces coelicolor dATP/ATP-loaded NrdR octamer · the same entry in another collection · chain H against H, TM-score 1.00
O69980 · AlphaFold monomer V2.0 prediction for transcriptional repressor nrdr (O69980) · a predicted model of the same protein · chain A against A, TM-score 0.72

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O69980
Elsewhere: RCSB PDB 7P3Q · PDBe 7P3Q · UniProt O69980

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