MolNFT v1 · #184593 · protein

Crystal structure of pig purple acid phosphatase in complex with 4-(2- hydroxyethyl)-1-piperazineethanesulfonic acid (hepes) and glycerol

7OV8: “Crystal structure of pig purple acid phosphatase in complex with 4-(2…”. X-ray diffraction, 4 ligands (NAG, FE, NA). MolNFT v1 #184593 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7OV8
Type: protein
Length: 303 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P09889
Ligands: NAG, FE, NA, PO4

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	303	—	P09889

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
FE · Fe (III) ion · metal · 2 copies · chains A
NA · Sodium ion · metal · 2 copies · chains A
PO4 · Phosphate ion · ion · chains A
GOL · Glycerol · additive · 16 copies · chains A
EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 6 copies · chains A
EDO · 1,2-ethanediol · additive · 4 copies · chains A
PGE · Triethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7OV8 · Crystal structure of pig purple acid phosphatase in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
P09889 · AlphaFold monomer V2.0 prediction for tartrate-resistant acid phosphatase type 5 (P09889) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P09889
Elsewhere: RCSB PDB 7OV8 · PDBe 7OV8 · UniProt P09889

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