MolNFT v1 · #184487 · protein
Non-structural protein 10 (NSP10) from SARS cov-2 in complex with fragment VT00022
7ORR: “Non-structural protein 10 (NSP10) from SARS cov-2 in complex with fragment VT00022”. X-ray diffraction, 3 ligands (PIM, ZN, CL). MolNFT v1 #184487 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ORR
- Type
- protein
- Length
- 124 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- PIM, ZN, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 124 | — | P0DTD1 |
Ligands and binding sites
- PIM · 4-phenyl-1H-imidazole · ligand · 2 copies · chains A
- ZN · Zinc ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · 2 copies · chains A
- DMS · Dimethyl sulfoxide · additive · 2 copies · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ORR · Non-structural protein 10 (nsp10) from SARS CoV-2 in complex with fragment VT00022 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 7ORR · PDBe 7ORR · UniProt P0DTD1
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