MolNFT v1 · #184386 · protein
Bacteriophage PRD1 major capsid protein P3 in complex with cpz
7OOK: “Bacteriophage PRD1 major capsid protein P3 in complex with cpz”. X-ray diffraction, 3 ligands (Z80, NA, CL). MolNFT v1 #184386 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OOK
- Type
- protein
- Length
- 1,119 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P22535
- Ligands
- Z80, NA, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, B, A | — | protein | 373 | — | P22535 |
Ligands and binding sites
- Z80 · 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine · ligand · 3 copies · chains C, B, A
- NA · Sodium ion · metal · 5 copies · chains C, B, A
- CL · Chloride ion · ion · 3 copies · chains B, A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 10 copies · chains C, B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22535
- Elsewhere: RCSB PDB 7OOK · PDBe 7OOK · UniProt P22535
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