MolNFT v1 · #184091 · protein
SARS cov-2 spike protein, bristol uk deletion variant, closed conformation, C3 symmetry
7OD3: “SARS cov-2 spike protein, bristol uk deletion variant, closed conformation, C3 symmetry”. Electron microscopy, 2 ligands (EIC, NAG). MolNFT v1 #184091 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OD3
- Type
- protein
- Length
- 3,036 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- EIC, NAG
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 1012 | — | P0DTC2 |
Ligands and binding sites
- EIC · Linoleic acid · ligand · 3 copies · chains A, B, C
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 33 copies · chains A, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OD3 · SARS CoV-2 Spike protein, Bristol UK Deletion variant, Closed conformation, C3 symmetry · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7OD3 · PDBe 7OD3 · UniProt P0DTC2
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