MolNFT v1 · #184037 · protein
X-ray structure of the phosphatase PAPP5 from arabidopsis thaliana
7OBE: “X-ray structure of the phosphatase PAPP5 from arabidopsis thaliana”. X-ray diffraction, 2 ligands (MN, CL). MolNFT v1 #184037 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OBE
- Type
- protein
- Length
- 955 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q84XU2
- Ligands
- MN, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 480 | — | Q84XU2 |
| B | — | protein | 475 | — | Q84XU2 |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 4 copies · chains A, B
- CL · Chloride ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OBE · X-ray structure of the phosphatase PAPP5 from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
- Q84XU2 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein phosphatase 5 (Q84XU2) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84XU2
- Elsewhere: RCSB PDB 7OBE · PDBe 7OBE · UniProt Q84XU2
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