MolNFT v1 · #184010 · protein
Conserved hypothetical protein residues 311-335 from candidatus magnetomorum sp. hk-1 fused to GCN4 adaptors, mutant BETA2/A
7OAH · General control transcription factor GCN4,CONSERVED…: “Conserved hypothetical protein residues 311-335 from candidatus magnetomorum sp. hk-1 fused to GCN4 adaptors…”. X-ray diffraction, 1 pocket (best druggability 0.42). MolNFT v1…
- PDB
- 7OAH
- Type
- protein
- Length
- 244 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General control transcription factor GCN4,CONSERVED hypothetical protein residues 311-335…
- UniProt
- P03069, A0A0N0D484
- Pockets
- 1 · best druggability 0.42
Structure
x-ray diffraction · 2 distinct chains · 81% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | General control transcription factor GCN4,CONSERVED hypothetical protein residues 311-335 from candidatus magnetomorum sp. hk-1 fused to GCN4 adaptors, mutant BETA2/A,GENERAL control transcription factor GCN4 | protein | 81 | 81% helix, 5% strand | P03069, A0A0N0D484 |
| C | General control transcription factor GCN4,CONSERVED hypothetical protein residues 311-335 from candidatus magnetomorum sp. hk-1 fused to GCN4 adaptors, mutant BETA2/A,GENERAL control transcription factor GCN4 | protein | 82 | 80% helix, 5% strand | P03069, A0A0N0D484 |
Ligands and binding sites
- PG4 · Tetraethylene glycol · additive · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 80 | 0.42 | 0.79 | 24 | empty |
Interfaces
3 interfaces between chains.
- A–B · 1797 Ų buried · 13 hydrogen bonds · protein-protein
- A–C · 1795 Ų buried · 15 hydrogen bonds · protein-protein
- B–C · 1779 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 7OAH · conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1… · the same entry in another collection · chain A against A, TM-score 1.00
- P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain C against A, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03069
- Every structure of UniProt A0A0N0D484
- Elsewhere: RCSB PDB 7OAH · PDBe 7OAH · UniProt P03069 · UniProt A0A0N0D484
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