MolNFT v1 · #183986 · protein
Crystal structure of the AWP3B (adhesin-like wall protein 3B) a-domain from candida glabrata
7O9O: “Crystal structure of the AWP3B (adhesin-like wall protein 3B) a-domain from candida glabrata”. X-ray diffraction, 2 ligands (NA, CL), 2 pockets (best druggability 0.38). MolNFT v1 #183986 on GenesisL1: 3D structure, binding sites…
- PDB
- 7O9O
- Type
- protein
- Length
- 328 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- AWP3B
- UniProt
- A0A7G7JIM8
- Ligands
- NA, CL
- Pockets
- 2 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | AWP3B | protein | 328 | 2% helix, 53% strand | A0A7G7JIM8 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.38 | 0.77 | 19 | empty |
| 2 | 69 | 0.29 | 0.73 | 25 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 7O9O · Crystal structure of the Awp3b (adhesin-like wall protein 3b) A-domain from Candida… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A7G7JIM8
- Elsewhere: RCSB PDB 7O9O · PDBe 7O9O · UniProt A0A7G7JIM8
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