GL1X · GenesisL1 explorer

MolNFT v1 · #18372 · protein

Glutathione transferase from proteus mirabilis

1PMT: “Glutathione transferase from proteus mirabilis”. X-ray diffraction, 1 ligand (GSH), 1 pocket (best druggability 0.46). MolNFT v1 #18372 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1PMT
Type
protein
Length
201 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Glutathione transferase
EC
2.5.1.18
UniProt
P15214
Ligands
GSH
Pockets
1 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 50% helix, 10% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGlutathione transferase (EC 2.5.1.18)protein20150% helix, 10% strandP15214

Ligands and binding sites

  • GSH · Glutathione · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11580.460.7631GSH

Modifications

Observed in the structure: 1 covalent (covalent ligand).

Compared structures

  • 1PMT · Glutathione transferase from proteus mirabilis · the same entry in another collection · chain A against A, TM-score 1.00
  • P15214 · AlphaFold monomer V2.0 prediction for glutathione S-transferase GST-6.0 (P15214) · a predicted model of the same protein · chain A against A, TM-score 0.99

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