MolNFT v1 · #183385 · protein

Structure of the mature rsv ca lattice: T=3 ca icosahedron

7NO1 · Capsid protein P27, alternate cleaved 1: “Structure of the mature rsv ca lattice: T=3 ca icosahedron”. Electron microscopy, 6 pockets (best druggability 0.51). MolNFT v1 #183385 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 7NO1
Type: protein
Length: 648 residues
Chains: 3
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Capsid protein P27, alternate cleaved 1
UniProt: P03322
Pockets: 6 · best druggability 0.51

Structure

electron microscopy · 1 distinct chain · 66% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	Capsid protein P27, alternate cleaved 1	protein	216	66% helix, 0% strand	P03322

Pockets

6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	377	0.51	0.72	75	empty
2	317	0.49	0.73	61	empty
3	319	0.48	0.72	66	empty
4	115	0.33	0.72	26	empty
5	115	0.32	0.72	24	empty

Interfaces

3 interfaces between chains.

A–C · 47 Å² buried · 0 hydrogen bonds · protein-protein
A–B · 34 Å² buried · 0 hydrogen bonds · protein-protein
B–C · 14 Å² buried · 0 hydrogen bonds · protein-protein

Compared structures

7NO1 · Structure of the mature RSV CA lattice: T=3 CA icosahedron · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03322
Elsewhere: RCSB PDB 7NO1 · PDBe 7NO1 · UniProt P03322

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