MolNFT v1 · #183346 · protein
Complex of rice blast (magnaporthe oryzae) effector protein APIKL2F with the host target SHMA94 from setaria italica
7NMM: “Complex of rice blast (magnaporthe oryzae) effector protein APIKL2F with the host target SHMA94 from setaria…”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #183346 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7NMM
- Type
- protein
- Length
- 1,350 residues
- Chains
- 16
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- K3YDQ6
- Ligands
- CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, D, E, F, G, H | — | protein | 78 | — | K3YDQ6 |
| C | — | protein | 77 | — | K3YDQ6 |
| I, J, K, M, N, O, P | — | protein | 91 | — | — |
| L | — | protein | 90 | — | — |
Ligands and binding sites
- CL · Chloride ion · ion · chains M
- EDO · 1,2-ethanediol · additive · 13 copies · chains C, L, E, N, I, A, J, K, D, P
- 1PE · Pentaethylene glycol · additive · 2 copies · chains L, N, H, P
- PEG · Di(hydroxyethyl)ether · additive · chains O
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NMM · Complex of rice blast (Magnaporthe oryzae) effector protein APikL2F with the host target… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K3YDQ6
- Elsewhere: RCSB PDB 7NMM · PDBe 7NMM · UniProt K3YDQ6
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