MolNFT v1 · #183337 · protein
Crystal structure of paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with di-mannuronic acid
7NM6 · Alginate lyase (PL7): “Crystal structure of paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with di-mannuronic…”. X-ray diffraction, 1 ligand (BEM). MolNFT v1 #183337 on GenesisL1: 3D structure, binding sites…
- PDB
- 7NM6
- Type
- protein
- Length
- 226 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alginate lyase (PL7)
- EC
- 4.2.2.3
- UniProt
- A0A485PVH1
- Ligands
- BEM
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alginate lyase (PL7) (EC 4.2.2.3) | protein | 226 | 8% helix, 54% strand | A0A485PVH1 |
Ligands and binding sites
- BEM · beta-D-mannopyranuronic acid · sugar · 2 copies · chains A
- BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 7NM6 · Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A485PVH1
- Elsewhere: RCSB PDB 7NM6 · PDBe 7NM6 · UniProt A0A485PVH1
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