MolNFT v1 · #183282 · protein
Methyl-coenzyme M reductase from methermicoccus shengliensis at 1.6-a resolution
7NKG: “Methyl-coenzyme M reductase from methermicoccus shengliensis at 1.6-a resolution”. X-ray diffraction, 4 ligands (COM, F43, K). MolNFT v1 #183282 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7NKG
- Type
- protein
- Length
- 4,964 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- COM, F43, K, SO4
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 566 | — | — |
| B, E, H, K | — | protein | 432 | — | — |
| C, F | — | protein | 247 | — | — |
| D | — | protein | 565 | — | — |
| G | — | protein | 564 | — | — |
| I | — | protein | 238 | — | — |
| J | — | protein | 563 | — | — |
| L | — | protein | 246 | — | — |
Ligands and binding sites
- COM · 1-thioethanesulfonic acid · ligand · 4 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
- F43 · Factor 430 · ligand · 4 copies · chains A, D, E, F, B, C, G, J, K, L, H, I
- K · Potassium ion · metal · 2 copies · chains A, D, G, J
- SO4 · Sulfate ion · ion · 5 copies · chains B, A, E, H, K
- GOL · Glycerol · additive · 3 copies · chains A, B, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NKG · Methyl-coenzyme M reductase from Methermicoccus shengliensis at 1.6-A resolution · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7NKG · PDBe 7NKG
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