MolNFT v1 · #182994 · DNA
Solution structure of DNA duplex containing a 2'-deoxy-2'2'- difluorodeoxycytidine (gemcitabine) modification
7NBK · DNA (5'-D(*CP*GP*TP*AP*(FFC)P*G)-3'): “Solution structure of DNA duplex containing a 2'-deoxy-2'2'- difluorodeoxycytidine (gemcitabine) modification”. Solution nmr. MolNFT v1 #182994 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7NBK
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*GP*TP*AP*(FFC)P*G)-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*CP*GP*TP*AP*(FFC)P*G)-3') | dna | 6 | — | — |
Interfaces
1 interface between chains.
- A–B · 294 Ų buried · 26 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 7NBK · Solution structure of DNA duplex containing a 2'-deoxy-2'2'-difluorodeoxycytidine… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7NBK · PDBe 7NBK
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