MolNFT v1 · #182896 · protein
Crystal structure of SARS-cov-2 nendou in complex with liza-7
7N7U: “Crystal structure of SARS-cov-2 nendou in complex with liza-7”. X-ray diffraction, 1 ligand (0MI). MolNFT v1 #182896 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7N7U
- Type
- protein
- Length
- 696 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- 0MI
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 348 | — | P0DTD1 |
Ligands and binding sites
- 0MI · 1-[(2~{R},4~{S},5~{R})-5-[[(azanylidene-$l^{4}-azanylidene)amino]methyl]-4-oxidanyl-oxolan-2-yl]-5-methyl-pyrimidine-2,4-dione · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7N7U · Crystal Structure of SARS-CoV-2 NendoU in complex with LIZA-7 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 7N7U · PDBe 7N7U · UniProt P0DTD1
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