MolNFT v1 · #182881 · DNA
Solution structure of the myc promoter G-quadruplex in complex with berberine: conformer a
7N7D · MYC2345: “Solution structure of the myc promoter G-quadruplex in complex with berberine: conformer a”. Solution nmr, 1 ligand (BER). MolNFT v1 #182881 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7N7D
- Type
- DNA
- Length
- 22 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MYC2345
- Ligands
- BER
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | MYC2345 | dna | 22 | — | — |
Ligands and binding sites
- BER · Berberine · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7N7D · Solution structure of the MYC promoter G-quadruplex in complex with berberine: conformer A · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7N7D · PDBe 7N7D
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