MolNFT v1 · #182826 · protein
Peptide-MHC complex of mouse H2-db presenting PA224 with E4C mutation
7N5Q: “Peptide-MHC complex of mouse H2-db presenting PA224 with E4C mutation”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #182826 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7N5Q
- Type
- protein
- Length
- 777 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P01899, P61769, O89752
- Ligands
- NA
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 279 | — | P01899 |
| B, G | — | protein | 100 | — | P61769 |
| C, H | — | protein | 10 | — | O89752 |
| F | — | protein | 278 | — | P01899 |
Ligands and binding sites
- NA · Sodium ion · metal · 11 copies · chains A, C, B, F, G
- ACT · Acetate ion · additive · 3 copies · chains A, B, F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7N5Q · Peptide-MHC complex of mouse H2-Db presenting PA224 with E4C mutation · the same entry in another collection · chain H against H, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01899
- Every structure of UniProt P61769
- Every structure of UniProt O89752
- Elsewhere: RCSB PDB 7N5Q · PDBe 7N5Q · UniProt P01899 · UniProt P61769 · UniProt O89752
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